Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDN----GKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTL--PFSEIREEYIAASNIWNRTLLFTEND-KQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF |
| 2EJ9 Chain:A ((2-235)) | -----------------------------------------------------------------------------------EIIHLSEIDSTNDYAKELAKEGKRNFIVLADKQNNGKGRWGRVWYSDEG-GLYFSMVLDSKL--YNPKVINLLVPICIIEVLKNYVDKELGLKFPNDIMVKVNDNYKKLGGILTELTD-----DYMIIGIGINVNNQIRN---EIREIAISLKEITGKELDKVEILSNFLKTFESYLEKLKNKEIDDYEILKKYKKYSITIGKQVKILLSNNEIITGKVYDIDFDGIV-LGTEKGI-ERIPSGICIH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EJ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113194 for 1781 contacts (-63.6/contact) +
2D Compatibility (PS) -24119 + (NN) -4959 + (LL) 6172
1D Compatibility (HY) -18800 + (ID) 3300
Total energy: -158200.0 ( -88.83 by residue)
QMean score : 0.484
|
|
|