Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLQTTYPSNNYPIFVEHGAID-HISTYIDQF---DQSFILIDEHVNQYFADKFDDILSYE--------NVHKVIIPAGEKTKTFEQYQETLEYILSHH--VTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFKDREILQ------SLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEYN--HKIAHGHAVMIGIIYQFIVANIL-FNSNHDIQHYINYLTKLGYP-------LETIT---DIDFETIYQYMLSDKKNDKQGVQMVLIKHFGDIVVQHIDQTTLQHACEQLKTYFK |
| 1DQS Chain:A ((4-391)) | --PTKISILGRESIIADFGLWRNYVAKDLISDCSSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRRRFEGTEEILKARILASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSAIGTPYETRASVVANEDIRVVL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222923 for 3017 contacts (-73.9/contact) +
2D Compatibility (PS) -36865 + (NN) -4519 + (LL) 676
1D Compatibility (HY) -22000 + (ID) 5200
Total energy: -290831.0 ( -96.40 by residue)
QMean score : 0.463
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