Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLD-VKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEESGL--IGAKELNSE---LLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQV--------DEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGY-EKIHTTNERMPIKSLNLLASQVLEIIKIVARQSK |
| 3TX8 Chain:A ((11-368)) | --LLGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRF-------NNNVLARTNRG----LASRVMLAGHIDTVPIADNLPSRVED-GIMYGCGT----VDMKSGLAVYLHTFATLATSTELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPTG--GWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESGVANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDGQ-DGIEWAVED--GAGGALPGLGQQVTSGLIDAV---GR-EKIRAKFGWTDVSRFSAMGIPALNFGAGDPSFAHKRDEQCPVEQITDVAAILKQYLS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102514 for 2977 contacts (-34.4/contact) +
2D Compatibility (PS) -36415 + (NN) -9848 + (LL) 2424
1D Compatibility (HY) -6400 + (ID) 3750
Total energy: -156503.0 ( -52.57 by residue)
QMean score : 0.417
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