Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNILVIGANGGVGSLLVQQLAKENV------PFTAGVRQSDQ---L--NAL-KSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTG----ADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQA----FDD---SGDLKPYTIAKHYADDYLRR----SGLNYTILHPGALTNAAGSG--K----I---------EA-AQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGE-QDIKDALTQFEIEKD |
| 1R6D Chain:A ((1-259)) | MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD-AGL-LARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG-RAGEIYHIGGGLELTNRELTGILLD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67572 for 1722 contacts (-39.2/contact) +
2D Compatibility (PS) -23246 + (NN) -6309 + (LL) 112
1D Compatibility (HY) -3200 + (ID) 1550
Total energy: -101765.0 ( -59.10 by residue)
QMean score : 0.404
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