Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKIENEIVNKTYLAINSLEELRNMIGIKSDYFYKCLYVNDHFYNVIKI-----PKRKKDEYRELMIPNMALKNIQRWILDNVLYRRQVHKCATGFVPRKSIVN--NAIPHV----GQKYILKMDIENFFPSIT-FKQVRKIFSEMGYKFELATALANLCTVNNQLPQGAPTSPYIANIIFYNIDK--RIFSYCQKNNLRYTRYADDITISGSNKVSFSKEIIREIVNQYNFRINES----KTIMFKP--------GDRKKVTGIIVNEKISVPKTLIREVRKQIYFVNKFGLEEHLIRNNYSLD---YEQQFIMSI-YGKISFIKMIDF-----KKGVSLQKKFNEV--------LGNIESSNMYRDNIDFDDIELHWIN |
| 1A5C Chain:A ((13-354)) | ----------LPADVAEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFG--TKG-LGKFISGAILFEETLFQKNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVI-----DTAKGKPT----DLSIHETAWGLARYASICQQNRL-VPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALG-PHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYK-GGAGG-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1A5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103606 for 2408 contacts (-43.0/contact) +
2D Compatibility (PS) -30650 + (NN) 6709 + (LL) 2264
1D Compatibility (HY) -1200 + (ID) 2150
Total energy: -128633.0 ( -53.42 by residue)
QMean score : 0.259
|
|
|