Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFNVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMDEYVKMTIGMPGLSETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMF-DKMYHVIETSTQQ
1XN6 Chain:A ((1-143))
---MEQQNTLNDIKQTIVFNASIQKVWSVVSTAEGIASWFMPN-------DFVLEVGHEFHV-----QSPFGPSPCKVLEIDEPNHLSFSWDTDG-----WVVSFDLKDLGDNKTEFTLIHGGWKHPDEILPK--ANAKSSIIRDRMSGGWVAIVNEKLKKVVEG----
General information:
TITO was launched using:
RESULT:
Template:
1XN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50991 for 988 contacts (-51.6/contact) +
2D Compatibility (PS) -14777 + (NN) -62 + (LL) 2428
1D Compatibility (HY) -6400 + (ID) 850
Total energy: -70652.0 ( -71.51 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_1XN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XN6-query.scw
PDB file :
Tito_Scwrl_1XN6.pdb
: