Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLTKQSQDFLEKLRVELLFRGK-TEAEVEELLEELEDHLTMAEKNNEDTSSIINTPIKSMADQLSPEISLTTGLYKYITLYFSFILAVIIIPRFLDLGTFDVTIAFLLYIASIVILGVVIGMLILRNTLVRFGDQKITYVINVTYGIVVFLWMIFGGLIIKKYPIYSFFELSDKQSFIVGLVLLIALIVICILIKQKIYALIVLVISLPSLIARIAAIFSKEPDTFNLVSVSILIILNIAFIIYTFVNFRKLKKED
1UMD Chain:A ((296-335))--------PIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1UMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138 for 152 contacts (-0.9/contact) +
2D Compatibility (PS) -4750 + (NN) -7064 + (LL) 21632
1D Compatibility (HY) 400 + (ID) 550
Total energy: 9530.0 ( 62.70 by residue)
QMean score : 0.641

(partial model without unconserved sides chains):
PDB file : Tito_1UMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UMD-query.scw
PDB file : Tito_Scwrl_1UMD.pdb: