Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTKQSQDFLEKLRVELLFRGK-TEAEVEELLEELEDHLTMAEKNNEDTSSIINTPIKSMADQLSPEISLTTGLYKYITLYFSFILAVIIIPRFLDLGTFDVTIAFLLYIASIVILGVVIGMLILRNTLVRFGDQKITYVINVTYGIVVFLWMIFGGLIIKKYPIYSFFELSDKQSFIVGLVLLIALIVICILIKQKIYALIVLVISLPSLIARIAAIFSKEPDTFNLVSVSILIILNIAFIIYTFVNFRKLKKED |
1UMD Chain:A ((296-335)) | --------PIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138 for 152 contacts (-0.9/contact) +
2D Compatibility (PS) -4750 + (NN) -7064 + (LL) 21632
1D Compatibility (HY) 400 + (ID) 550
Total energy: 9530.0 ( 62.70 by residue)
QMean score : 0.641
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