Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRALETIATLREYRKSLKESVGFVPTMGALHRGHQSLIERSLK-ENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKACEKLKKLGLEILKNLEVDYLECCNHKLEPLKTIEPANTL--VLVAARVGKTRLLDNLWV
4DDK Chain:B ((34-285))--------------------VMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFG------AYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLRTTVQ---PGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDAAPGVAVDYLELRDIGLGPM----PLNGSGRLLVAARLGTTRLLDNIAI


General information:
TITO was launched using:
RESULT:

Template: 4DDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128808 for 1938 contacts (-66.5/contact) +
2D Compatibility (PS) -26224 + (NN) -9281 + (LL) 3140
1D Compatibility (HY) -19200 + (ID) 5250
Total energy: -185623.0 ( -95.78 by residue)
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_4DDK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DDK-query.scw
PDB file : Tito_Scwrl_4DDK.pdb: