Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDFSQLGGLSGLLDGVKKEFSQLEEKNKDTIHTSKSGGGMVSVSFNGLGELVDLQIDDSLLE-DKEAMQIYLMSALNDGYKAVEENRKNLAFNMLGNFAKL
1J8B Chain:A ((7-98))
--LGGLM---KQAQQ-QEKMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLMEDDKEMLEDLIAAAFNDAVRRAEELQKEKMASVTAG----
General information:
TITO was launched using:
RESULT:
Template:
1J8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13761 for 485 contacts (28.4/contact) +
2D Compatibility (PS) -9130 + (NN) -4646 + (LL) 432
1D Compatibility (HY) 4000 + (ID) 450
Total energy: 3967.0 ( 8.18 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_1J8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J8B-query.scw
PDB file :
Tito_Scwrl_1J8B.pdb
: