Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKPFNSEQMAFLEELLSHQEKHLESKLSGFSVNDLDMQSVFRL--------ERNRLKIAYRLLGLMSFIALVLAIV-------LISILPLQK---------TEHHF--VDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKAQNSIYVQ----SHLEREV---------HIVN-------IAIYQQDNNPIAS------VSIAAKLLNENKLVYEKRYKIVLSYLFDTPDFDYASMPKNPTGFKITRYSITEIAPTNRND- |
| 2IM9 Chain:A ((49-352)) | NSAAIEEQANSSIRKLYHTLNTTSMADRISQISAYFKGTKYILGSLGEGPNARYDQFPRYRVDGFDCDTYVNTVLSLALANSLESFQECLKHTRYKNGKRSYINRNHFTSIDWNNYNQKRGLLKDITFSIRNEKKQPVALYANALINKPQWYNHKTIDTIRLQK-QDKNEQEKRLVELKAKGKTLETSLSNVPYIPFTALFSENKPNLHLFSQIPNGAVIEIIRPNWDLRQQIGTELDISHLGFAIWINNELFFRQASSQYGKVVDVSLIDYLDKARSSPTIKGINIQVVLPEKPVCQLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57180 for 1719 contacts (-33.3/contact) +
2D Compatibility (PS) -25703 + (NN) -4243 + (LL) 176
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -93850.0 ( -54.60 by residue)
QMean score : 0.144
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