Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYWTKLSIEYANQRSYLDDLFQV-YPTIPEGLR-EIDSKIWSNVEYHFKRKDNLALITE-LLNLDLF-P-IKDSYMAYLKRDKSALERNPRTINRICGRLYEMGLNKIFEKCSEPKETNRQIGPMFKDWI-NNKSLGVEPVDLNDFIANENDAILKASDNVMAEFAKSHLNYHHHKGLDFVARFNKKYIIGEAKFLTDFGGHQNAQFNDAINTIETPNIKAIKVAILDGVLYIESNNKMRKLLDTTYR-NYHIMSALV-LREFLYQI--- |
| 4G3A Chain:A ((5-231)) | -------------KPSDLDGFIQQMPKA-----DMRVKVQLAEDLVTFLSDDTNSIVCTDMGFLIDGLMPWLTGSHFKIAQKSLEAFSELIKRLGSDFNAYTATVLPHVIDRLGDSRDTVREKAQLLLRDLMEHRVL--PPQALIDKLATSCFK--HKNAKVREEFLQTIVNALHEYGTQQLS--VRVYIPPVCALLGD----------------PTVNVREAAIQTLV-EIYKHVGDRLRPDLR---RMDDVPASKLAMLEQKFDQVKLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4G3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -32446 for 1621 contacts (-20.0/contact) +
2D Compatibility (PS) -22695 + (NN) -8380 + (LL) 2568
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -68903.0 ( -42.51 by residue)
QMean score : 0.293
|
|
|