Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MLKRIKVGSDLNKKESLLDAFVKTYLQTLEPISSKRLKELANLKVSCATIRNYFQILSKE---------GMLHQAHSSGA-----RLPTFKAF------ENYWHKSLRFEVLK-------VNEKRLKSASENFGLFTLLKKPSLERLERVIECEKR------FLILDFLA-------FSCAVGYSVKMEKFLLELVGRSVKEVRLIAAS-VNALSLARQLERLEYSSAQITRFNLMGLKTLLNSPLFFDILEGKVLERFKKGLHFIEPDCMLVTRPIEFQNERMQLLCVGK--LECDYEGFFQTISKEE----------- |
| 1KHD Chain:A ((12-344)) | THQPILEKLFKSQSMTQEESHQLFAAIVRGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRCDLLQAFGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHGGGMDEVAIHTPTQVAELNNGEIESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVAANVALLLKLFGQDNLRHNAQLALETIRSGTAFERVTALAAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104033 for 2180 contacts (-47.7/contact) +
2D Compatibility (PS) -27769 + (NN) -2642 + (LL) 0
1D Compatibility (HY) -800 + (ID) 1650
Total energy: -136894.0 ( -62.80 by residue)
QMean score : 0.255
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