Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --M-KKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNG-N-QSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGLS-NQQYAINGFGFVVGYKHFF----------KKAPQF-GMRYYGFFD---------FASSYYKYY-TYNDYGMRDARKGSQSFMFGY-GAGTDVLFNPAIFNRENLHFGF-------FLGVAIGGTSWG-----PT-NYYFKDLAEEYRGSFHPSNFQVLVNGGI------RLGTKHQGFEIG------LK-IQTIRNNYYTASADNVPEGTTYRFT-FHRPYAFYWRYIVSF------ |
| 3LZK Chain:A ((19-358)) | FQGMKLATLKDSTRDGKLVVVSKDLTRCSEVGHIART----LQAALDDWAHAGPRLERVAEGIETGAQPTMRFHEHDAASPLPRAFQWADGSAYVNHVELVRKAR-NAEMPASFWTDPLIYQGGSDSFLGPRDPILMADDAWGIDMEGEAAVIVDDVPMGATLDEAKAAIRLVMLVNDVSLRGLIPGELAKGFGFYQSKPSSAFSPVAVTPEELGEAWDGGKLHLPLHVDLNGEPFGRANAGIDMTFDFPQLIVHAARTRPLSAGTIIGSGTVSNKLEGGPGRPVSEGGAGYSCIAELRMIETIEGG--APKTQFLKFGDVVRIEMKDRTGHSIFGAIEQKVGKYER |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57636 for 2150 contacts (-26.8/contact) +
2D Compatibility (PS) -30459 + (NN) -11273 + (LL) 308
1D Compatibility (HY) 0 + (ID) 2200
Total energy: -101260.0 ( -47.10 by residue)
QMean score : 0.183
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