Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSFLEKNPFFFTLAFIFVFSIAGLVEILPNFFKSARPIEGLRPYTVLETAGRQIYIQEGCYHCHSQLIRPFQAEVDRYGAYSLSGEYAYDRPFLWGSKRIGPDLHRVGDY---------RTTDWHEKHMLDPKSVVPHSIMPAYKHLFIKKSDFDTAYAEALTQKKVFGVPYDTENGVKLGNVEEAKKAYLEEAKKITADMKDKRVLEAIERGEVLEIVALIAYLNSLGNSRINANQNAK |
2YEV Chain:B ((232-326)) | --------------------------------------------APVADERGQQVFQ-QNCAACHGVARSMP-------------------------PAVIGPELGLWGNRTSLGAGIVENTPENLKAWIRDPAGMKPGVKMPGFPQLSEE--DLDALVRYLEGLKVEGFDFGALPKF--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12963 for 575 contacts (-22.5/contact) +
2D Compatibility (PS) -8935 + (NN) -3266 + (LL) 10244
1D Compatibility (HY) 0 + (ID) 1050
Total energy: -15970.0 ( -27.77 by residue)
QMean score : 0.089
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