Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKRLRRLRSSENLRAMVRETRLNINDFIAPLFVIESDSGIKNEISSMPGVYQMSIEPLLKECEELVGLGIKAVLLFG---IPKHKDATGSHALNKDHIVAKATREIKKRFKDLIVIADLCFCEYTDHGHCGIL-ENASVSNDKTLKILNLQGLILAESGVDILAPSNMMDGNVLSLRKALDKAGYFH-TPIMSYSTKFASSYYGPFRDVANSPPSFGDRKSYQMDYANQKEALLESLEDEKQGADILMVKPALAYLDIVKEIRDHTL-LPLALYNVSGEYAMLKLAQKHNLINYESVLLETMTCFKRAGADMIISYHAKEVANLLQRN |
| 1EB3 Chain:A ((27-338)) | -------------LRQWQSERQLTKNMLIFPLFISDNPDDF-TEIDSLPNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTFYLDIMRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIITYLAPEFLDWLDE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188115 for 2682 contacts (-70.1/contact) +
2D Compatibility (PS) -33072 + (NN) -14455 + (LL) 1308
1D Compatibility (HY) -23600 + (ID) 5700
Total energy: -263634.0 ( -98.30 by residue)
QMean score : 0.607
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