Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRELMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFAAREF
1WKK Chain:A ((2-136))
--ERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFFRPEEL
General information:
TITO was launched using:
RESULT:
Template:
1WKK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65712 for 1026 contacts (-64.0/contact) +
2D Compatibility (PS) -14243 + (NN) -1929 + (LL) 272
1D Compatibility (HY) -12800 + (ID) 3500
Total energy: -97912.0 ( -95.43 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_1WKK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WKK-query.scw
PDB file :
Tito_Scwrl_1WKK.pdb
: