Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQEILIPLKEKSYKVFLGELPEIKLKQKALIISDSIVAGLHLPYLLERLNALEVRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGIDFINIPTTLLAQVDASVGGKTGINTPYGKNLIGSFHQPKAVYMDLAFLKTLEKREFQAGVAEIIKMAVCFDKNLVERLETKDLKD--------CLEEVIFQSVNIKAQVVVQDEKERNIRAGLNYGHTFGMLIENETNYERFLHGEAIAIGMRMANDLALSLGMLTLKEYERIENLLK---KFDLIFNYQITDIQKFYERLFLDKKSENQTLKFILPKGVGAFEIASHIPKETILKVLEKWH |
1XAL Chain:B ((59-348)) | -----------------------------------------------------VHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFKQILSGYAEVYKHALLNGESATQDIE-QHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVE---YYHKIPHGHAVMVGIIYQFIVANALFDSKHDISHYIQYLIQLGYPLDM---------------MLSDKKNDKQGVQMVLMRQFGDI-VVQHVDQLTLQHACEQLK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126422 for 2150 contacts (-58.8/contact) +
2D Compatibility (PS) -28304 + (NN) -4892 + (LL) 6952
1D Compatibility (HY) -20400 + (ID) 4800
Total energy: -177866.0 ( -82.73 by residue)
QMean score : 0.414
|
|
|