Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIWLLVWGLYSLAFLHAIETIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATN-L-FLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSVDAVLHLHDGGGYYRPVYIDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIENINAHLLHPIEKYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKEL-PLESRVFYHLQAIEGLLNQLNIPFKRDFELNPNSVHALINDKSLWAKI-SSLPKMPLFNLRPKLNHFPLPSNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDHSLEEV-KMQIDNKDQMVKIGSVVEVKE-SFYIHAMDNI-RANVIGFSVSNESKPNETGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKF-V----- |
| 3FMC Chain:A ((4-368)) | VDKHEVRVGELAAGQPLSLPVYRFKGK------GAGPSVYIQANVHGAEVQGNAVIYQLMKLLEHYELLGDISLVPLANPLGINQKSGE--------------------------------FTLGRFDPITGVNWNREY-------------------LDHGFNIEVWYQEHSHLDDDTLITAFRATLVEECARRLNNPWGVTTGHRLAVTLQ---------------SMAHRADIVLDLHTGPKSCKHLYCPEYERSAAQYFSIPYTLLIPNSFGGAMDEAAFVPWWTLAEVASSHGRELGVRVSALTLELG----SQERIDLDDALEDAEGILAYLSHRGVIAETVLPKPMKRYGCFLKNYRKFHA--PKAGMVEYLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPILHFAS--------ASVHQGTELYKVMTKVFEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45328 for 2848 contacts (-15.9/contact) +
2D Compatibility (PS) -37067 + (NN) -5257 + (LL) 6432
1D Compatibility (HY) 3200 + (ID) 1950
Total energy: -79970.0 ( -28.08 by residue)
QMean score : 0.200
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