Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPN-------------RVSKEQLRSFRSIH-----DKMARNLSSQVSSIMRS-IVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLL--DTILRQVMQILKEVW--------------SPVVEMY--------PTIDAKESSANV-------------------VQIVAQNEISI-MVVLEIIIGHSRG--------MMNICYPVISI--ESIL----------SKMGSRDFMLSETNSKKSRNKELQALLSGVSVDMMVFLGAVELSLKEMLDLDVGDTIRLNKVANDEVSVYVHKKKRYLASVGFQGYRKTIQIKEVVYSEKER------TKEILEM----------LEEQRRGKVGDIMK---IEEE--------------------------------- |
| 4IWS Chain:A ((23-515)) | MNRSALDFRHFVDHLRRQGDLVDVHTEVDANLEIGAITRRVYERRAPAPLFHNIRDSLPGARVLGAPAGLRADRARAHSRLALHFGLPEHSGPRDIVAMLRAAMRAEPIAPRRLERGPVQENVWLGEQVDLTRFPVPLLHEQDGGRYFG---TYGFHVVQ-TPDGSWDSWSVGR-LMLVDRNTLAGPTIPTQHIGIIREQWRRLGKPTPWAMALGAPPAALAAAGMPLPEGVSEAGYVGALVGEPVEVVRTQTNGLWVPANTEIVLEGEISLDETALEGPMGEYHGYSFPIGKPQPLFHVHALSFRDQPILPICVAGTPPEENHTIWGTMISAQLLDVAQNAGLPVDMVWCSYEAATCWAVLSIDVQRLAALGTDAAAFAARVAETVFGSHAGHLVPKLILVGNDIDVT--EIDQVVWALATRAHPLHDHFAFPQIRDFPMVPYLDAEDKARGSGGRLVINCLYPEQFAGQMRAATASFRHAYPTALRRRVEERWSDYGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20272 for 2523 contacts (-8.0/contact) +
2D Compatibility (PS) -35404 + (NN) 2377 + (LL) 444
1D Compatibility (HY) -6800 + (ID) 3250
Total energy: -62905.0 ( -24.93 by residue)
QMean score : 0.133
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