Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGDKV---VWVLKNNGEWQPFDVRNKKAFSLSRLMHFARCCASFKKKTIDN---YENPILSSNLANG-ERVQIVLSPVTVNDETISISIRIPSKT--TYPHSFFEEQGFYNLLDNKEQAISAIK-DGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEER-IISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELRSSEA-YDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIKHR |
| 1P9R Chain:A ((35-303)) | -----------------------------KLI-NAMLGEAIKEGASDIHIETFEKTLSIRFRVD-GVLREVLA-----PSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISL-----AVDVRVSTMPSSH---GERVVMRLLDKNATRLDLHSL---GMTAHN------HDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDG-IGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHL-VMSTLHTNTAVGAVTRLRDMGIEP------------FLISSSLLGVLAQRLVRTLCPDCKEPY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148120 for 1838 contacts (-80.6/contact) +
2D Compatibility (PS) -26898 + (NN) -8261 + (LL) 4516
1D Compatibility (HY) -2000 + (ID) 2400
Total energy: -183163.0 ( -99.65 by residue)
QMean score : 0.334
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