Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKGIAKSRKS
3BVI Chain:C ((15-180))
MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKGIAKSRK-
General information:
TITO was launched using:
RESULT:
Template:
3BVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80697 for 1248 contacts (-64.7/contact) +
2D Compatibility (PS) -18038 + (NN) -10372 + (LL) -28
1D Compatibility (HY) -24000 + (ID) 8300
Total energy: -141435.0 ( -113.33 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_3BVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BVI-query.scw
PDB file :
Tito_Scwrl_3BVI.pdb
: