Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIHIGVLSASDRASKGVYEDLSGKAIQEVLSE-YLLNPLEFHYEIVADERDLIEKSLIKMCDEYQCDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNKSLIINLPGKPKSIRECLEAVFPAIPYCVDLILGNYMQVNEKNIQAFRPKQ
1JLJ Chain:A ((13-181))
-HQIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHD-------
General information:
TITO was launched using:
RESULT:
Template:
1JLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101241 for 1412 contacts (-71.7/contact) +
2D Compatibility (PS) -17583 + (NN) -3681 + (LL) 748
1D Compatibility (HY) -12400 + (ID) 3550
Total energy: -137707.0 ( -97.53 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_1JLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JLJ-query.scw
PDB file :
Tito_Scwrl_1JLJ.pdb
: