Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHDKEGKLTGYDVEVARELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTIMLVRKDENRIKDIRDIKGLKAANTLSSTYGEIAFKYD--AQIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFK--IAWESKEKDGGASFVINKHQEKALELINQAMRRLINKGVLKRLGEQFFGKDVSQP
2Y7I Chain:A ((3-228))
---------------------------VSARTLHFGTSATYAPYEFVDADNKIVGFDIDVANAVCKEMQAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKREQ-QVSFSQPYYEGLSAVVVTRK-GAYHTFADLKGKKVGLENGTTHQRYLQDKQQAITPVAYDSYLNAFTDLKNNRLEGVFGDVAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKDNDALLQEINAALDKVKASPEYAQMQEKWFT------
General information:
TITO was launched using:
RESULT:
Template:
2Y7I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86196 for 1858 contacts (-46.4/contact) +
2D Compatibility (PS) -24479 + (NN) -13197 + (LL) 2736
1D Compatibility (HY) -10800 + (ID) 2500
Total energy: -134436.0 ( -72.36 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_2Y7I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y7I-query.scw
PDB file :
Tito_Scwrl_2Y7I.pdb
: