Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLFKEITSKCYVNGNEMKENSSNVLDQYF-TKPSVALKCFQKACEVIKKYENPDDFIFLEPSAGDGVFYDLFPKD--RRIGIDIEPKRD---------------GFIQCDFLNYKLPVHQKVICLGNPPFGHRGVMALEFINHA-R-NCDFVCFILPMF----FES----QGKGSIKYRVK-GLNLLYSERLEKNAFIDFKNKEVDVHCVFQIWSKKYQNKKSEFSWYKNRHKEPFSEYIKVFTVSLAKNRECGKEWIFNQKASFYISSTFYKSTQIVENFEEVKYQSGIAVVFTSADKVLNAKLKKLFQEIDWTKYASLATNSCYHLGKSHIFQALHDHLDSLKGN |
2H1R Chain:A ((2-179)) | -----------------------------HLLKNPGILDKIIYAAKIK-------SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEV----AIKTVF--PKFDVCTANIPYKISSPLIFKLISHRPLFKCA--VLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFN----PPPKVDSVIVKLIPKESSFLTNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLEHNYKNWCTLNKQVPVNFPFKKYCLDVLEHLDMCEKRSINLDENDFLKLLLEFNKKGIHFF------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64442 for 1013 contacts (-63.6/contact) +
2D Compatibility (PS) -15582 + (NN) -3896 + (LL) 4984
1D Compatibility (HY) -6800 + (ID) 1200
Total energy: -86936.0 ( -85.82 by residue)
QMean score : 0.359
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