Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDWNEFEMGAVLFPFEKNAQSEMEKHNDERHYTEQSYFTTSVAHWRVAKPVHNNNICINCFNCWVYCPDAAILSREGKLKGVDYSHCKGCGVCVDVCPTNPKSLWMFEEQIEPATALTQWPQKQEKKKS
4CI0 Chain:B ((214-273))
---------------------------------------------------VVNQGLCIGCGTCAMACQTRALDMTNGRPE-LNSDRCIKCGICYVQCPRS----WWPEEQIKKEL--------------
General information:
TITO was launched using:
RESULT:
Template:
4CI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42396 for 331 contacts (-128.1/contact) +
2D Compatibility (PS) -6057 + (NN) -2527 + (LL) 4740
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -51640.0 ( -156.01 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_4CI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CI0-query.scw
PDB file :
Tito_Scwrl_4CI0.pdb
: