Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGYASKLALKICLVGLCLFSTLGAEHLEQKGNYIYKGEEAYNNKEYERAASFYKSAIKNGESLAYILLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGY----TNAYINLGIMYMEGRGVPSNYAKATECFRKAMHK-GNVEAYILLGDIYYSGNDQLGIEPDKDKAVVYYKMAADVSSSRAYEGLSESYRYGLGVEKDKKKAEEYMQKACDFDIDKNCKKKNTSSR |
3RJV Chain:A ((20-206)) | -------------------------------AQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRN-PQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGMMFQQGEK-GFIEPNKQKALHWLNVSCLEGFDTGCEEFDRISK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69147 for 1571 contacts (-44.0/contact) +
2D Compatibility (PS) -20116 + (NN) -14113 + (LL) 4712
1D Compatibility (HY) -3200 + (ID) 1950
Total energy: -103814.0 ( -66.08 by residue)
QMean score : 0.431
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