Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPHINAKIGDFYPQCLLCGDPLRVSYIAKNFLQDAKEITNVRNMLGFSGKYKGKGISLMGHGMGIASCTIYVTELIKTYQVKELLRIGTCGAISPKVGLKDIVMATGASTDSKTNRVRFLNHDLSATPDFELSLRAYQTAKRLGIDLKIGNVFSSDFFYSFETHAFGLMAQYNHLAIEMEAAGLYATAMELNAKALCLCSVSDHLITKEALSPKERIESFDNMITLALEMMS
1A69 Chain:C ((2-230))
-TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIR----TTAAERQTTFNDMIKIALESVL
General information:
TITO was launched using:
RESULT:
Template:
1A69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -196748 for 1939 contacts (-101.5/contact) +
2D Compatibility (PS) -23444 + (NN) -4429 + (LL) 572
1D Compatibility (HY) -24000 + (ID) 6100
Total energy: -254149.0 ( -131.07 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_1A69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A69-query.scw
PDB file :
Tito_Scwrl_1A69.pdb
: