Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWVEDNPNDGSKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSLEIQRLQLEIGGLRGVKFAKLTKASSFEYNE
3QSI Chain:F ((4-81))
---------------------------------------------------------------KIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKA-------
General information:
TITO was launched using:
RESULT:
Template:
3QSI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50010 for 542 contacts (-92.3/contact) +
2D Compatibility (PS) -8667 + (NN) -2842 + (LL) 3376
1D Compatibility (HY) -12000 + (ID) 3850
Total energy: -73993.0 ( -136.52 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3QSI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QSI-query.scw
PDB file :
Tito_Scwrl_3QSI.pdb
: