Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------MLETTIDFSRYSSVKIGAPLKVSV-----------LENDNEISQEHQIIGLANNLLIAPD-VKNLALLGKNYDYICDKGEWVEVGGAANASKIFNYFRANDLEGLEFLGQLPGTLGALVKMNAGMKEFEIKNVLESACV-----NGEWLEKEALGLDYRSSGFNG---VVLRARFKKTHGFREGVLKACKSMRKSHPK-----LPNFGSCFKNPPNDYAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAKTRVLQEYGIHLEEEVKILR---- |
1HSK Chain:A ((15-317)) | NKDIYQALQQLIPNEKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHIEVSDDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTKELELDYRNSIIQKEHLVVLEAAFTLAPGKMTEIQAKMDDLTERRESKQPLEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRIIGEHPK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161549 for 2131 contacts (-75.8/contact) +
2D Compatibility (PS) -27724 + (NN) -5292 + (LL) 0
1D Compatibility (HY) -16400 + (ID) 3350
Total energy: -214315.0 ( -100.57 by residue)
QMean score : 0.506
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