Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------------------------------------------------------------------MKMANTK-TEQDFEKVLKRRDLIAANFRWLFASQICWNYERMMSTGYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNT-----NPMVGGLI--LGMDMAIEE-REKKASKEVVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAY----MGLQGNVTGVVIWVLVNILVVGAR--FTLLPLGYKQGAKLVTEFADRLNALTDAAILLGVTVVGALIPTVIKATVPFVYKS-GKVELKMQDMLDQIMPSLV---PVLLVALIYALLGHKKMTSTKAILLVMVIAIILFNLKILG--- |
4D10 Chain:B ((34-447)) | VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTQ-LLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160747 for 1821 contacts (-88.3/contact) +
2D Compatibility (PS) -27950 + (NN) -4314 + (LL) 92
1D Compatibility (HY) -5200 + (ID) 1900
Total energy: -200019.0 ( -109.84 by residue)
QMean score : 0.337
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