Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDIPYLKMMQKEHDFFAKTMRDSNIEVLYLEKLAAEA--LREANNKESFLTKMIKESNQMDESAL--YVRDYLMSFDEEEMIRKLMSGLKKSEIPERKKKHLNEMMDEQYPFFLDPLPNLYFTRDPAAVIGNGVTINRMFQPARRRESIFIELILKHHPRFSNQDIPVWSGRGEPFSLEGGDELVLNEETVLVGVSERTDARAVERLAESL-FNRSPKIKRVLAVEIPETRSFMHLDTVFTMVNFAQFTIHPAIQNQQGELNIYILEKSENGLEITP------RRDFQRVIAEVLDEPEIDFIPCGGE-----DVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSRGRGGPRCMTMPLVRENLK
4E4J Chain:D ((35-432))-----GINVYSEIGELKEVLVHTPGDEIRYTAPSRLEELLFSAVLKADTAIEEHKGFVKILQNNGIKVIQLCDLVAETYELCSKEVRNSFIEQYLDEALPVLKKEIRPVVKDYLLSFPTVQMVRKMMSGILANE--------LNIKQDN--PLIIDGMPNLYFTRDPFASMGNGVSINCMKYPTRKREVIFSRFVFTNNPKYKNTP-RYFDIVGNNGTIEGGDIFIYNSKTLVIGNSERTNFAAIESVAKNIQANKDCTFERIVVINVPPMPNLMHLDTWLTMLDYDKFLYSPNMMN--------VLKIWEIDLNVKPVKFVEKKGTLEEVLYSIIDKKPI-LIPIAGKGANQLDIDI---ETHFDGTNYLTIAPGVVVGYERNEKTQKALVEAGIKVLSFNGSQLSLGMGSARCMSMPLIRENLK


General information:
TITO was launched using:
RESULT:

Template: 4E4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159812 for 3287 contacts (-48.6/contact) +
2D Compatibility (PS) -41265 + (NN) -22428 + (LL) 2328
1D Compatibility (HY) -37600 + (ID) 7450
Total energy: -266227.0 ( -80.99 by residue)
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_4E4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4E4J-query.scw
PDB file : Tito_Scwrl_4E4J.pdb: