Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSILMAIIQITGIFIAIQILTNKVFSIKEGLVTIAIAMLAFPLFTLVQYWSMIFVLIVFVSALYWKNKNVVVSASITLVVIILLTISDSIVGFILVPGLNFKYDEIFNELLPTLIYCAGMLANLLVFSFLLRKLIEKVNISRFVEHRKYAYIIFSIVALTVLAFYMNIYAGSIAGFDGSVLKINTLIFTGYTILLIVIVTVVINTATNELKVQNQKEQLEQLQDYVTTLESLHREMRVFRHDYVNILSTLVGYIDNNDMPGLKYYFENNIVPINKTIESNNYKISLLQNIHVIELKGLLAVKLIRAQELKIDAILEVVEPIDKISMDSIDLCKVVGILLDNAVEAALTCENPVIRIAFVKKGDSIIIVFANSLPV-NMPPIYKIFEEGFSTKGEGRGLGLASLREIMK-KYSHVALDTKVT--DREVIQELEIM |
| 3A0Y Chain:A ((616-750)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------REVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGE--NGKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFFTTK--GTGLGLSICRKIIEDEHGG-KIWTENRENGVVFIFEIPK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83201 for 932 contacts (-89.3/contact) +
2D Compatibility (PS) -14194 + (NN) -4951 + (LL) 29524
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -77622.0 ( -83.29 by residue)
QMean score : 0.504
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