Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLPVFICEDNRMQRERLTKYIEDYIMVEHFDMKLELSTGDPFELVSRMPTHQGM-GLYFLDIDLGQPDMNGFELAQEIRKFDPRGFIIFITTHAEL--SYMTFTYKVEALDYIIKDDIDL-LHDRVLACMKQAEERISNDQDMQKYFTFKVSDKKIIHELLDDILFFETAPTIHKVILHGKNRQVEFYGKLKNIEKMLDESFYRCHRSYIVNKKNIHELDTTKGVVKMSNGENCYASSKLIKSLSL
3F6C Chain:A ((1-121))
SLNAIIIDDHPLAIAAIRNLLIKN----DIEIL--AELTEGGSAVQRVE--TLKPDIVIIDVDI--PGVNGIQVLETLRKRQYSGIIIIVSAK---FYGKHCAD--AGANGFVSKKEGMNNIIAAIEAAKNGY-----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3F6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104164 for 875 contacts (-119.0/contact) +
2D Compatibility (PS) -12760 + (NN) -10186 + (LL) 9804
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -123006.0 ( -140.58 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_3F6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6C-query.scw
PDB file :
Tito_Scwrl_3F6C.pdb
: