Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYKIVALLMLLCFAFAPGVLAADSDSYLENNGKMDIKTDRLQKTEEEKTKELEQMEETELDKNGIPLFTDEMDEKIAKEKAAEKAEYDRIKDSLFEEESTSGETVKKTKEKLFTGEYETTAVNTETPTTTETTVEDETKKTKQKTVGGAIAGTLVALAGGIYVAARNVFE |
1NYH Chain:A ((1271-1346)) | -------------LSFVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENARSQISEKDAKINKLME---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14522 for 302 contacts (48.1/contact) +
2D Compatibility (PS) -8385 + (NN) -2842 + (LL) 7472
1D Compatibility (HY) -2400 + (ID) 400
Total energy: 7967.0 ( 26.38 by residue)
QMean score : 0.353
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