Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYKNGENRIYAVNDEGVEVGEVTFVPTGEDMFIIDHTGVDDAARGQGIAQELVKRAVEKAKSEGKKIVPLCPFAKAEFSKKPEYQEVEASK
1R57 Chain:A ((5-92))
-EIKQGENKFYIGDDENNALAEITYRFVDNNEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLKIIASCSFAKHMLEKEDSYQDVY---
General information:
TITO was launched using:
RESULT:
Template:
1R57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24023 for 607 contacts (-39.6/contact) +
2D Compatibility (PS) -9647 + (NN) -6651 + (LL) 388
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -47283.0 ( -77.90 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_1R57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R57-query.scw
PDB file :
Tito_Scwrl_1R57.pdb
: