Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MSDYLVKALAYDGMARVYAAVTTE-----TIKEAQRRH----------DTWSVSSAALGRT--MTGTLFLGAMQKEDQKITVKIEGDGPIGPIVADSNAQGQIRGYVTNPHVHFSELNEAGKLDVRRGVGTSGMLSVVKDLGFGENFTGQTPIVSGEIGED--------FTYYLATSEQINSS-VGVGVLVNPDDTIEAAGGFMLQLLPGATDEIIDEIEKNLMALPTVSRMIEAGETPESILAKLAGGEDKLQILEKIPVSFECNCSKERFGSAIISLGKEEIRSMIEEDHGAEAECHFCRNTYDFSEEELKTLYEEAK |
| 4A1N Chain:A ((19-311)) | KAVLEQFGFPLTGTEARCYTNHALSYDQAKRVPRWVLEHISKSKIMGDADRKHCKFKPDPNIPPTFSAFNEDYVGSGWSRGHMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNS-----GYWNRIEMYCRELTERFE-DVWVVSGPLTLPQTRGD--------GKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTEPLALGAFVVPNEAI----GFQPQ---------LTEFQVSLQDLEKLSGLVFFPHLDRTSDIRNICSVDTCKLLD--FQEFTLYLSTRKIEGSV--LRLEKIMVNLKNEIE--------------PDDYFMSRYEKKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36572 for 1750 contacts (-20.9/contact) +
2D Compatibility (PS) -25912 + (NN) 245 + (LL) 2856
1D Compatibility (HY) -8000 + (ID) 2800
Total energy: -70183.0 ( -40.10 by residue)
QMean score : 0.185
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