Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAKAKRTTKFVCQACGYESAKWMGKCPNCNEWNQMVEALEPSKKSRSAFNHTGEPSKATPITQIASETEKRVETNMPELNRVLGGGVVPGSMVLVGGDPGIGKSTLLLQVSAQLTLTNKKVLYISGEESIKQTKLRAERLQVSGDNLYVYAETNLEAVQETIDFVKPDFVVIDSIQTVYHSDVTSAAGSVSQVRECTATLMRIAKMQNIAIFIVGHVTKEGAIAGPRLLEHMVDTVLYFEGERHHAYRILRAVKNRFGSTNEMGIFEMRDVGLVEVANPSEVFLEERLEGASGSTVVASMEGT-RPVLVEIQALVSPTMF-GNAKRMATGIDY----NKVSLIMAVLEKRVGLMLQNQDAYLKAAGG-VKLDEPAVDLAVAVSVASSYRDKPTRSTDCFIGELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPKNNEGNWKIP----KDVQVVGVETIGEALKKALPD
3K1J Chain:A ((400-578))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSEIGRVNGLAVIGEQSGIVLPIEAVVAPAASKEEGKIIVTGKLGEIAKEAVQNVSAIIKRYKGEDISRYDIHVQFLQTYEGVEGDAASISVATAVISALEGIPIRQDVAMTGSLSVRGEVLPIGGATPAIEAAIEAGIKMVIIPKSNEKDVFLSKDKAEKIQIFPVETIDEVLEIALE-


General information:
TITO was launched using:
RESULT:

Template: 3K1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -80630 for 1405 contacts (-57.4/contact) +
2D Compatibility (PS) -18528 + (NN) -10095 + (LL) 20884
1D Compatibility (HY) -7600 + (ID) 2050
Total energy: -98019.0 ( -69.76 by residue)
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_3K1J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K1J-query.scw
PDB file : Tito_Scwrl_3K1J.pdb: