Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQENEQEWIGGRNPVLEVLRSDRDIHKIYVQEGSQKGVLKQVLTLAKERKIQVQFVPKQKIEKVVSGAHQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFIILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVT-NMVRTMEELQKRGLWIFGTDAKGSS---D------YR--TMDVDMPLAIVIGSEGFGMSRLVREKCDFLVHLPMRGKVTSLNASVAASLLLYEVYRKRFPLEK
3ILK Chain:A ((5-163))
------------------------------------------------------------------------------------------------LENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSPKS--VDEQSYALSAGAENIVKNARVVDSFDEAVDD----CSLVIGTSARLRHLQNTLIEPRECAEKVVAYKGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLV---
General information:
TITO was launched using:
RESULT:
Template:
3ILK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106811 for 1148 contacts (-93.0/contact) +
2D Compatibility (PS) -16091 + (NN) -8379 + (LL) 9216
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -132165.0 ( -115.13 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_3ILK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ILK-query.scw
PDB file :
Tito_Scwrl_3ILK.pdb
: