Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKPLVGINMKNYINTRAQTSEWLEATIPLLGNFSDVDTFIFPSMGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQVTQFKNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGDETL--VRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG
5BMX Chain:C ((35-244))----------------------------------SKLDVVVFPVSVHYDHTRKLLQ-SKFSTGIQNVSKFGNGSYNGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDII--------


General information:
TITO was launched using:
RESULT:

Template: 5BMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107481 for 1611 contacts (-66.7/contact) +
2D Compatibility (PS) -22845 + (NN) -12382 + (LL) 2712
1D Compatibility (HY) -17200 + (ID) 3800
Total energy: -160996.0 ( -99.94 by residue)
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_5BMX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BMX-query.scw
PDB file : Tito_Scwrl_5BMX.pdb: