Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDYVITTELPSA-EEFVQLRVDAGL----SFRAIEASR-------------KALLKS-VYFVGLRSKENGKLIGMGRLVGDG--------IMFIVSDIAVFPSFQGKGFGKVIMTHIKDYIEANLDKTACVTLLA-DVPAHGLYKQFGFRESAPASIGMIYQVGN
1TIQ Chain:A ((2-153))
-SVKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYF--DHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAH----------
General information:
TITO was launched using:
RESULT:
Template:
1TIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75516 for 791 contacts (-95.5/contact) +
2D Compatibility (PS) -13583 + (NN) -5886 + (LL) 944
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -98691.0 ( -124.77 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1TIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIQ-query.scw
PDB file :
Tito_Scwrl_1TIQ.pdb
: