Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQTIKANSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAGIMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTVTIYPAAINTELLETITDKET----EQGMTSLYKQYGITPDRIASIVAYAIDQPEDVNVNEFTVGPTSQPW
2JAP Chain:B ((5-246))--LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERG--VRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRK---LQAQDIAEAVRYAVTAPHHATVHEIFIRPTDQ--


General information:
TITO was launched using:
RESULT:

Template: 2JAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -142553 for 2081 contacts (-68.5/contact) +
2D Compatibility (PS) -25707 + (NN) -8616 + (LL) 260
1D Compatibility (HY) -13600 + (ID) 4550
Total energy: -194766.0 ( -93.59 by residue)
QMean score : 0.645

(partial model without unconserved sides chains):
PDB file : Tito_2JAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAP-query.scw
PDB file : Tito_Scwrl_2JAP.pdb: