Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPIKLLSPEEIADDDYFIPAAMMGAPSVLIE--------KFPKGDEFVRVFEKLGRYVGKEVKGTFPMEAG-GVNSMIP-----IVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIGIMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSI--KNIVTLSEEIGKVIRETSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKID-----GLNKDTNSEVIVHFQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRV-MALPA------------DDAWRTDKGIETVGPRYFGYDVDFEPLEELVKK-EERRHV-- |
| 4Q9T Chain:A ((12-446)) | TKILTETEKYSVTKLSTDLSFLPFEGLVDTALQKALVN----DLDHIYIWNYNSIQKDTPICKISLHSSPPICLFTSSINGICIINKKNSQFLYFEDISTINNLAHVLDLKLKDNENITSTINCEPSGIIIATSLGRVLFITIKDSTGKPKL-----------ELKQQLIKPQNSFFFRNLDSSKEIISLKKGPIVGKGERLLYITTRGGSLQIWQLSINSKSFKRLEINIYEHVLDSLQDLYPFAHGTLAFLDSHPIYSD--TSSAHLTLASISNGNEIYYLMITVILDEKTNSFQIFSIYKLNTYFTKSTVDLNHKPQLFIPNALDSIVSPTLSVYVLFNNAVVMTQISSKLDSSFPLRRKWEDIIRFNKDVEIIGSGY-----STDSIYVICKDMGVLKIASH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14934 for 2550 contacts (-5.9/contact) +
2D Compatibility (PS) -34975 + (NN) 9497 + (LL) 1752
1D Compatibility (HY) -12400 + (ID) 2900
Total energy: -53960.0 ( -21.16 by residue)
QMean score : 0.097
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