Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKVYEIFILDWRRLFKAPLALLLVIALIILPSLYAWFNIEALWDPYSNTSGIKVAVSIDDEGAEIDVPGKKPQQVNVGNQLKKTLEKNKKLGWTFVSEDEAKKGVKSGKYYASIHIPKDFSEDMVSVVNDNVTKPTIDYSVNEKINAIAPKMTESGATTIVNQISSEFVGTVSKAVLEEFNKAGIDLENELPTIRRLKTKVFQVQDALPELKKMGAEAVKIEAKLPELKAKANQVVELNEKIPELNKATENVLLVEQQLPKIDQLGQDILVLQKKIPEIKQIAESVKEVDENFGTIKKTVNDAVNESGKALDVIDTAMAAIPTVEKIAQNGSGYVDKVSDFADEINKSFDTLAPAIKQNLTLMKQMADNIYQVTEAIKNGSITPEQAITELKKMEQDIDSLQQMITKQTATLESLNETLPNKPFTDLIANLKTINSQLGAQKETITKVRTELENGAQPSEELLNQLNEQAKNVSEKLDQILANYDSEIVPAIKVGLNQIQGDLKDSQKLLETLQAKIPEITQVLKDSRETLQTGQTYLEEFQERLPEIQKTLDEATKVINTKLDTIIAGINEAANFYQNDYPNVKANIKKAANFIRDDLPGLEKEINQASGLIQEKMPEFEKAIKIAADLSREELPEFEKAINNAANKITDFDKNYDLQSIIKMLRNDADKDSSFIASPVKLKETSYYPIPNYGSASSPFYTALCLWVGALLLISLLRVDVEVPAGIFSHYHRYFGRLLTFLSIGLMQALIVTLGNIFLLGVSIAEPLLHVLFSMFISVVFMTIVYTLVSLFNNVGKGIAIILLVLQISGAGGNFPIQVSPPFFQAIYPFLPFTYAVSLIRESVGGLYMPTVWIDMSVLAGFAILFITLGILLKKPLDKVVPKLSEKAKRSKLIH |
4HPQ Chain:C ((2-411)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NEAVIEKLLENSRKFLTGAKLICQESNDHLTTTKLRIREWQKFQSKLHFVLDCIQQQTKFLSEILLREGIGRNLIEEEWSQTVLVRLVNDMKFWQNEITKMMNKLDNITNEIDQQHN--SKLGDFISR--DSSHILDSKLNEIPTIRKQVENITRQYQTMLAKVQSQLVESRMKGLRDEFSEEFTNEADQLEQELADFLKSFTDHFDKCSALSSRSVSPEDAQNLFEIVERDDKDLAAINSLLQDAAIDVASFVRKVNMLLDERDADKAK--MQATLSKLLTELRKHEEYISVFEGISALIQKFKASCLEDIRQTRNLLDFYANFERSYHNLLKEVKRRKETAAKLSQILKSCETQLEQINTADLRERQMFLLENGNYLPETIWPDEIGSLSPLYTLNYEVR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 36701 for 2440 contacts (15.0/contact) +
2D Compatibility (PS) -41935 + (NN) -7450 + (LL) 38492
1D Compatibility (HY) 2400 + (ID) 2000
Total energy: 26208.0 ( 10.74 by residue)
QMean score : 0.455
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