Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLNNEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQFNGKRVTKNELANNLSTTPIEQNGLHGNPDKAFVGSISGDSPGLGVNHAPIAKLAAKYVNEAHVHDISGNSIQDIITVLSTGAPVWIITTTDYHAPKNWQTVQTKEG----KKKITYSMHSVIITGFDKN---------NFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLSRP |
2WBF Chain:X ((157-228)) | ------------------------------------------------------------------------------------------------------------------------------------------------------VKIIKTEVMNKGSVIAYIKAE--NV---MGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWG---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21233 for 297 contacts (-71.5/contact) +
2D Compatibility (PS) -6269 + (NN) -1039 + (LL) 11316
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -20425.0 ( -68.77 by residue)
QMean score : 0.459
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