Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGINTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYST-PGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK
3DEU Chain:A ((23-162))
---------LESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQ----------KRIKLTEKAEPLIAEMEEV--IHKTRGEILAGISSEEIELLIKLIAKLEHNIMEL-
General information:
TITO was launched using:
RESULT:
Template:
3DEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45987 for 774 contacts (-59.4/contact) +
2D Compatibility (PS) -13879 + (NN) -2779 + (LL) 872
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: -67823.0 ( -87.63 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_3DEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DEU-query.scw
PDB file :
Tito_Scwrl_3DEU.pdb
: