Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPATGELVVGAT--KQAEQAFKNLAAVLEEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSSDFPARSAFQVAKLPLDAEIEIEVIAEA
3MQW Chain:D ((27-146))
----VVASPLAPEAVGAYSQAIICNGMVYCSGQIGLDRKTGDFA-GKTIEEQSKQVMTNLKYVLEEAGSSMDKVVKTTCLLADIKDFGVFNGIYAEAFGNHKPARACFAAAALPKGALVEVECIA--
General information:
TITO was launched using:
RESULT:
Template:
3MQW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41966 for 889 contacts (-47.2/contact) +
2D Compatibility (PS) -13068 + (NN) -7561 + (LL) 960
1D Compatibility (HY) -11600 + (ID) 2550
Total energy: -75785.0 ( -85.25 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3MQW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MQW-query.scw
PDB file :
Tito_Scwrl_3MQW.pdb
: