Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIINENEQLVAETVSRRIIELVK-----EKPASLICIAGGDTPLLTIEALIKANQAGEVDFSNTQFVGLDEWVGLGRETKGSCIQTLYDAFFDRLKNVSSEQICFFDGKATSLTDECARVDKFIDDRGGMDFILLGIGLNGHIGFNEPFVPVDVNCHVVELDDVTKRVMSKYFDT--DLPLTHGISLGMQQILAAKEIFLVATGEKKIDIVKQVVEKEPTVAIPATLVK-DSNTMLVVDKIAASGVEA
3HN6 Chain:A ((22-269))
MRLIIRPTYEDISKWAANHVAQKINEFSPTKENPFILGLPTGSSPIGMYKNLIELNKNKKISFQNVITFNMDEYIGIEENHPESYHSFMWNNFFSHI-DIKKENINILNGNASNLKKECEEYEKKIKSFGGIMLFVGGIGPDGHIAFNEPGSSLTSRTRIKTLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVSDKNATYELK-
General information:
TITO was launched using:
RESULT:
Template:
3HN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -203626 for 2042 contacts (-99.7/contact) +
2D Compatibility (PS) -25686 + (NN) -8748 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 2750
Total energy: -254602.0 ( -124.68 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_3HN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HN6-query.scw
PDB file :
Tito_Scwrl_3HN6.pdb
: