Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LVKVVFVCLGNICRSPMAEGLFRKEVANAGLTDEIKIDSAATGTWNLGKPPHRGTQEVLKKHGVDYQAMRARKISDADFKEADFIIGMDQQNLADLNALNNNPDVI---IRSLMSFVSGQEDKDIPDPYYTGDFDETERMVTEGVKALLAYITKK
3IDO Chain:A ((22-150))
-MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSI-SRPVVSSDFKNFDYIFAMDNDNYYEL--LDRCPEQYKQKIFKMVDFCTTIKTTEVPDPYYGGE----------------------
General information:
TITO was launched using:
RESULT:
Template:
3IDO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39752 for 974 contacts (-40.8/contact) +
2D Compatibility (PS) -13784 + (NN) -8502 + (LL) 2512
1D Compatibility (HY) -13600 + (ID) 2300
Total energy: -75426.0 ( -77.44 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_3IDO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IDO-query.scw
PDB file :
Tito_Scwrl_3IDO.pdb
: