Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIVESKLAGVKLVKPKVFGDHRGFFMESYNEKAFHEA--GIDMKFIQDNHSLSVEAGVLRGMHYQTNPKAQTKLIRVATGAIYDVVVDMRKGSPTYGEWEGYILSEANKHQLLVPQGFAHGFCTITENVNVLYKVDQLYSPENDAGIAYDDPDLNITWPTD---KLILSDKDTKHPRLKDAENNFVWENK
1OI6 Chain:B ((16-182))
---------------PRVFADDRGLLILPYQEEAFVEAHGGPLFRVAQTIHSMS-KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLSRSYVTQDELALSALDPALGL--PIDIGVEPIVSDRDRVAITLAEAQRQ------
General information:
TITO was launched using:
RESULT:
Template:
1OI6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42741 for 1201 contacts (-35.6/contact) +
2D Compatibility (PS) -17498 + (NN) -7556 + (LL) 2652
1D Compatibility (HY) -14400 + (ID) 2700
Total energy: -82243.0 ( -68.48 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_1OI6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OI6-query.scw
PDB file :
Tito_Scwrl_1OI6.pdb
: