Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENNVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTVGNNKKVVANVIESAGMEALYTIDEPTAAAAVLDL------QNGAVVDVGGGTTGISVFENGEVIY-----TADEPTGGTHMTLVLAGYYGVPV-------------------EEAEQNKRAQKDS----------------------SEHFSVMRPVVEKMAEITRVHLEKS-----PSEPLYIVGGASAYSQFKDTFESYLK-MPVFQPNYPQYVTPLGIAMSSGSENL |
| 3QFU Chain:A ((134-392)) | ---------------------------------------------------------------------------SGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61128 for 1513 contacts (-40.4/contact) +
2D Compatibility (PS) -21085 + (NN) -8136 + (LL) 6116
1D Compatibility (HY) -6000 + (ID) 2450
Total energy: -92683.0 ( -61.26 by residue)
QMean score : 0.373
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